PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.L2RLN
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 511aa    MW: 57813.1 Da    PI: 7.2283
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.L2RLNgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.11.2e-09459508147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                      + +W+  E+e l  +v+++G g+WktI +      ++R + ++k++w++ 
      Aradu.L2RLN 459 KRKWSSLEEETLRTGVQMFGAGNWKTIQSFYSdvfEHRLAVDLKDKWRNM 508
                      569*********************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.644454511IPR017930Myb domain
SuperFamilySSF466892.03E-14456510IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.2E-12458510IPR009057Homeodomain-like
SMARTSM007177.5E-8458511IPR001005SANT/Myb domain
PfamPF002496.8E-7459508IPR001005SANT/Myb domain
CDDcd116606.27E-17460510No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009901Biological Processanther dehiscence
GO:0010152Biological Processpollen maturation
GO:0043067Biological Processregulation of programmed cell death
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 511 aa     Download sequence    Send to blast
MDPDIARWVA EFHLRSSAPD SLVSKILRVL NLSGADPKLK KTLLLRTLRS QLCNASITET  60
ALEILEQIEA IDRNDAVPII DSMRRAYCAV AVECTVKFLP ASYDGTTSGE YLSAVTRIWR  120
GRVEELEQRQ SELFFDEIAR WRDDIEAALF DTRVSDRLKE LNTRNDAFTE VRFYLQEVWE  180
TMGPSFLESV AEMTKNKGKT KGKGKELPNV ILNPVPETRV VGCTTGVCRN ASGAEQARDH  240
GVDDNGDDDN DGSRCMDGVE VKRAEGSVDG TQEPAKEKKA RGNPLQRKPP AFRRCSRGVK  300
MSSAEELGTE RSWRKNDTVL SGEVKTARES LKSSFSELRA LVNDPLPEAL DISDAVRSKL  360
ARKGTNHEQP MENHSRDVDV PNSNTCMAII PYQPKDAEHK KLPSVHHSRV NAERPNSIEP  420
NNTAHKRPSL MEPNGTSQTY EWNDSIENMP NGMQLRRKKR KWSSLEEETL RTGVQMFGAG  480
NWKTIQSFYS DVFEHRLAVD LKDKWRNMMR Y
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015949024.10.0PREDICTED: uncharacterized protein LOC107473941 isoform X1
RefseqXP_015949028.10.0PREDICTED: uncharacterized protein LOC107473941 isoform X1
RefseqXP_015949031.10.0PREDICTED: uncharacterized protein LOC107473941 isoform X1
TrEMBLV7BLL51e-139V7BLL5_PHAVU; Uncharacterized protein
STRINGGLYMA18G05900.21e-132(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF28243260
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58340.27e-17MYB_related family protein